Naphthalene Pathway Map

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This pathway was contributed by Dr. Larry Wackett, University of Minnesota.The links in the Naphthalene Dioxygenase Reaction, such as the enzyme link to Kyoto University and links therein, including PROSITE through the University of Geneva, are very informative.

Naphthalene is a fused ring bicyclic aromatic hydrocarbon and thus serves as a model for understanding the properties of a large class of environmentally prevalent polycylic aromatic hydrocarbons (PAHs). Naphthalene and its substituted derivatives are commonly found in crude oil and oil products. Certain PAHs are strong human carcinogens leading to widespread interest in the microbial metabolism of these compounds.

This pathway was based on Eaton et al., 1992. Naphthalene dioxygenase, the enzyme which initiates bacterial naphthalene metabolism, is used in a biotechnological process to synthesize the blue jean dye indigo. This versatile enzyme has many other catalytic abilities, which are documented in a table of the Reactions of Naphthalene 1,2-Dioxygenase.

The following is a text-format naphthalene degradation pathway map. Organisms which can initiate the pathway are given, but other organisms may also carry out later steps. Follow the links for more information on compounds or reactions. This map is also available in graphic (12k) format.

                        Naphthalene
                   Pseudomonas sp. NCIB 9816-4, G7
                             |
                             | naphthalene
                             | 1,2-dioxygenase
                             |
                             v
                     cis-1,2-Dihydroxy-
                        1,2-dihydro-
                        naphthalene
                             |
                             | 1,2-dihydroxy-1,2-
                             | dihydronaphthalene
                             | dehydrogenase
                             |
                             v
                       1,2-Dihydroxy- <------ from the Phenanthrene Pathway
                        naphthalene
                             |
                             | 1,2-dihydroxy-
                             | naphthalene    
                             | dioxygenase
                             |
                             |
                             v
                    2-Hydroxychromene-
                      2-carboxylate
                          (HCCA)
                             |
                             | 2-hydroxychromene-
                             | 2-carboxylate
                             | isomerase
                             |
                             v
                      trans-o-Hydroxy-
                     benzylidenepyruvate
                          (tHBPA)
                             |
                             | tHBPA
                             | hydratase-aldolase
                             |
                             v
                      Salicylaldehyde
                             |
                             | salicylaldehyde
                             | dehydrogenase
                             |
                             v                  from the
      +---------------- Salicylate  <---------- Dibenzofuran Pathway
      |                      |                  Fluorene Pathway
      | salicylate           | salicylate       1-Naphthoic Acid Pathway
      | 5-hydroxylase        | hydroxylase
      |                      |
      v                      v
  Gentisate               Catechol
      |                      |
      |                      |
      |                      |
      |                      |
      |                      |
      v                      v
Intermediary               to the
 Metabolism             Nitrobenzene
   (KEGG)                 Pathway

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Page Author(s): Yuemo Zeng; up-dated by Carla Essenberg

March 14, 2006 Contact Us

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